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Experiment herm2, region R6.

Sample reads: 437,033. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 1623.44 3714.67 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. F31E3.5 eef-1A.1 1599.03 3658.83 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
3. Y24D9A.4 rpl-7A 1492.62 3415.35 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
4. C04F12.4 rpl-14 1399.88 3203.15 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
5. Y105E8A.16 rps-20 1319.83 3019.99 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
6. E04A4.7 cyc-2.1 1277.86 2923.94 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
7. RIT1P.688 1249.55 2859.16
8. F56E10.4 rps-27 1232.95 2821.19 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
9. Y18D10A.17 car-1 1153.88 2640.25 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
10. F59D8.2 vit-4 1127.52 2579.94 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
11. Y71F9AL.13 rpl-1 1125.37 2575.03 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
12. F36A2.6 rps-15 1115.81 2553.14 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
13. ZC434.2 rps-7 1091.40 2497.30 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
14. F13B10.2 rpl-3 1088.47 2490.60 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
15. C49H3.11 rps-2 1079.39 2469.82 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
16. B0041.4 rpl-4 1076.56 2463.34 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
17. F52B5.6 rpl-25.2 1069.73 2447.71 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
18. F40F11.1 rps-11 1053.33 2410.18 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
19. T27E9.1 ant-1.1 1038.69 2376.68 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
20. R05G6.7 vdac-1 1026.00 2347.64 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
21. T04C12.6 act-1 1020.14 2334.24 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
22. C42C1.14 rpl-34 993.00 2272.14 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
23. R13A5.8 rpl-9 973.28 2227.02 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
24. Y71A12B.1 rps-6 971.13 2222.10 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
25. W09C5.6 rpl-31 966.45 2211.38 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
26. Y82E9BR.3 Y82E9BR.3 964.49 2206.91 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
27. F37C12.4 rpl-36 963.52 2204.68 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
28. K02B2.5 rps-25 959.61 2195.74 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
29. C14B9.7 rpl-21 956.00 2187.48 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
30. F39B2.6 rps-26 953.76 2182.34 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
31. F42C5.8 rps-8 951.80 2177.87 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
32. F25H2.5 ndk-1 941.07 2153.30 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
33. ZK354.5 msp-51 934.43 2138.11 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
34. F59D8.1 vit-3 916.66 2097.46 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
35. T04C12.4 act-3 901.72 2063.29 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
36. K11H12.2 rpl-15 894.21 2046.09 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
37. D1007.6 rps-10 886.59 2028.66 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
38. F28C6.7 rpl-26 880.05 2013.70 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
39. F10B5.1 rpl-10 877.61 2008.11 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
40. T07A9.14 T07A9.14 874.10 2000.07
41. K07H8.10 K07H8.10 871.75 1994.71
42. C44B12.5 perm-4 859.65 1967.01 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
43. C56C10.8 icd-1 841.69 1925.91 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
44. Y45F10D.12 rpl-18 841.49 1925.46 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
45. B0513.3 rpl-29 830.75 1900.89 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
46. R13H9.4 msp-53 828.02 1894.64 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
47. F26D10.3 hsp-1 818.06 1871.86 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
48. T22F3.4 rpl-11.1 817.38 1870.29 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
49. F11C3.3 unc-54 810.25 1853.99 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
50. Y75B12B.2 cyn-7 769.25 1760.17 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
51. K08D12.3 K08D12.3 762.42 1744.53
52. Y69A2AR.18 Y69A2AR.18 762.42 1744.53
53. M01F1.2 rpl-16 756.46 1730.91 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
54. C07H6.5 cgh-1 755.29 1728.23 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
55. D2096.8 nap-1 754.61 1726.66 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
56. R09B3.3 R09B3.3 748.75 1713.26
57. K02F2.2 ahcy-1 746.80 1708.79 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
58. H02I12.1 cbd-1 742.89 1699.86 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
59. Y106G6H.2 pab-1 738.01 1688.69 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
60. B0250.1 rpl-2 734.69 1681.10 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
61. R13H9.2 msp-57 734.69 1681.10 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
62. C42D8.2 vit-2 731.77 1674.40 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
63. T01C3.6 rps-16 717.90 1642.68 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
64. Y48B6A.14 hmg-1.1 714.78 1635.53 HMG [Source:RefSeq peptide;Acc:NP_496970]
65. C34E10.6 atp-2 713.61 1632.85 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
66. C06B8.8 rpl-38 706.78 1617.21 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
67. R151.3 rpl-6 702.09 1606.49 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
68. F02A9.3 far-2 696.04 1592.64 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
69. B0393.1 rps-0 690.37 1579.69 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
70. T04C12.5 act-2 677.98 1551.32 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
71. Y57G11C.15 sec-61 674.56 1543.50 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
72. ZK652.4 rpl-35 663.82 1518.93 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
73. K07H8.6 vit-6 659.33 1508.65 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
74. F53G12.10 rpl-7 655.52 1499.94 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
75. Y48B6A.2 rpl-43 648.98 1484.98 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
76. W08E12.7 W08E12.7 639.22 1462.64
77. F23A7.4 F23A7.4 627.70 1436.28
78. C23G10.3 rps-3 625.95 1432.26 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
79. W01D2.1 W01D2.1 614.62 1406.35 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
80. F28D1.7 rps-23 613.25 1403.22 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
81. F40F8.10 rps-9 613.25 1403.22 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
82. F54C9.5 rpl-5 607.20 1389.37 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
83. C06A1.1 cdc-48.1 598.42 1369.27 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
84. M03F4.2 act-4 594.02 1359.22 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
85. T05E11.1 rps-5 594.02 1359.22 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
86. F56F3.5 rps-1 589.83 1349.61 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
87. F46F11.2 cey-2 589.63 1349.17 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
88. T05F1.3 rps-19 589.04 1347.83 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
89. C09H10.2 rpl-41 588.85 1347.38 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
90. F56D12.5 vig-1 584.94 1338.44 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
91. F37C12.9 rps-14 584.75 1338.00 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
92. C16A3.9 rps-13 579.67 1326.38 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
93. K07F5.11 ssq-1 567.37 1298.24 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_501768]
94. F53A3.3 rps-22 566.20 1295.56 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
95. ZC395.10 ZC395.10 566.20 1295.56 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
96. ZK1010.1 ubq-2 559.95 1281.26 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
97. Y57G11C.16 rps-18 556.15 1272.55 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
98. F01G4.6 F01G4.6 550.09 1258.70 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
99. F23A7.8 F23A7.8 548.63 1255.35
100. F57B9.5 byn-1 547.26 1252.22 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA